BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A02SP1|AL427096
(1042 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig308 1768 0.0
>3x_Contig308
Length = 1037
Score = 1768 bits (890), Expect = 0.0
Identities = 937/946 (99%), Gaps = 6/946 (0%)
Strand = Plus / Plus
Query: 43 agaaagtattgaacagcttttgactcaaatcaagactgattcagatgatgaagttagaga 102
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 agaaagtattgaacagctattgactcaaatcaagactgattcagatgatgaagttagaga 66
Query: 103 tagagcatccattgctttgcaattcatcgattcggttaagtccaagaaagatgtttccaa 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tagagcatccattgctttgcaattcatcgattcggttaagtccaagaaagatgtttccaa 126
Query: 163 tatcgcacaaaatttcattcgcccaacttctacctatgacgttgttgctcttgaatcaaa 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tatcgcacaaaatttcattcgcccaacttctacctatgacgttgttgctcttgaatcaaa 186
Query: 223 actatcacactatttgtcacaaggccaagaggcattcaagactccatttgacgtctcgtc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 actatcacactatttgtcacaaggccaagaggcattcaagactccatttgacgtctcgtc 246
Query: 283 agttgccaaatactccgaagacgagaagaaggcattggatttgaaacgcagacaagagca 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agttgccaaatactccgaagacgagaagaaggcattggatttgaaacgcagacaagagca 306
Query: 343 agccttcaaccatacagaagaatcttccaacagtggtgccggaaatggtaacggtactga 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agccttcaaccatacagaagaatcttccaacagtggtgccggaaatggtaacggtactga 366
Query: 403 aaagggtggtagaaagggtgatagattggatgacaatagcttcaatggaccttcattgga 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaagggtggtagaaagggtgatagattggatgacaatagcttcaatggaccttcattgga 426
Query: 463 atctgaagaagaagatttgctattgtccaaatacgtggatgaaatgtcctccttggaaca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atctgaagaagaagatttgctattgtccaaatacgtggatgaaatgtcctccttggaaca 486
Query: 523 attccagtcctttggcaagtgtatccattcttccaagattgtcccattaacggaaattga 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 attccagtcctttggcaagtgtatccattcttccaagattgtcccattaacggaaattga 546
Query: 583 agctgaattcgttgtgaagggtatcaagcatttgtttgacgagcacgttgtattacaatt 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agctgaattcgttgtgaagggtatcaagcatttgtttgacgagcacgttgtattacaatt 606
Query: 643 ccatatcactaacacattgaaggacgttgcgcttgataacgttgaagtggtatgccaaca 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ccatatcactaacacattgaaggacgttgcgcttgataacgttgaagtggtatgccaaca 666
Query: 703 agaaggattatcagagggtttacttgacgaacaagaggaatttgttttgcctattgaaag 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 agaaggattatcagagggtttacttgacgaacaagaggaatttgttttgcctattgaaag 726
Query: 763 actcttacccaatgaaggagagtcatgttacgtatcgttcaagaaactaacacagaacaa 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 actcttacccaatgaaggagagtcatgttacgtatcgttcaagaaactaacacagaacaa 786
Query: 823 ggatgatatcattgtagaaagattcagcaactcgttgaaattccaatccaaggaattaga 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ggatgatatcattgtagaaagattcagcaactcgttgaaattccaatccaaggaattaga 846
Query: 883 cccatctacctctttgccattcg-agatgacg-agggtt-cmagatgaatacgaatttga 939
||||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||||
Sbjct: 847 cccatctacctctttgccattcgaagatgacgaagggttccaagatgaatacgaatttga 906
Query: 940 ttcattgttcttgagt-ccggtgacwa-atgaaa-catcattcgta 982
|||||||||||||||| |||||||| | |||||| |||||||||||
Sbjct: 907 ttcattgttcttgagtcccggtgactacatgaaaccatcattcgta 952
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8832
Number of Sequences: 1807
Number of extensions: 8832
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 1042
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1026
effective length of database: 10,329,639
effective search space: 10598209614
effective search space used: 10598209614
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)